Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015805063.1_cds_XP_016491986.1_8220
CDS Infomation

[gene=LOC107811540] [db_xref=GeneID:107811540] [protein=protein phosphatase 1 regulatory subunit 7-like] [protein_id=XP_016491986.1] [location=complement(join(29236..29832,29908..29988,30121..30207,30314..30409,30534..30598,31576..31632,31734..31815,33953..34045,34126..34197,34293..34391))] [gbkey=CDS]
Sequence

ATGGCAGTGTTGAGCTGGAAGCAAGTGTTGGAAGACAACAACACCACTGACCCAAACTCC
ATTACTTCTCTTTCCCTTACTCACAAAGCTCTTTCTGATGTTTCGTGTTTGAGCGAGTTC
AAGAATTTGCAGAGGCTTGATCTTGGCTTTAATAATTTAACTTCACTCGAGGGGTTGAAG
TTATGTGTGAATTTGAAGTGGCTGTCTGTTGTACAAAACAAACTTCAGAGCTTGAAAGGG
ATTGAAGGGCTTATTAAACTCACTGTACTGAATGCTGGAAAAAACAAGCTCAAATCTATG
GACGAGGTCAGTGGTCTTGCTAACTTGCGAGCACTGATTTTGAATGACAATGACATTTTT
TCGATTTGCAAGCTTGATAAAGTGCAAGAGCTGAATACATTAGTCCTTTCTAGAAATCCT
ATATCTGGAATTGGGCAGAGTCTGGCCAAAATTAACTCAATCACAAAATTGTCTCTCTCT
AATTGCCAGCTACAAGGTATTGACTCTTCACTCAAATCCTGCACTGAGTTAAAGGAGCTA
CGCCTTGCTCATAATGATATTAAGACACTTCCCAATGAGTTGGCTTTTAATATAAAACTA
CAAAACATAGACATCGGAAACAATGTGATCATGAAGTGGTCAGATTTGAAGGTGCTGTCT
TCATTGGTTAACTTGAAAAACTTAAACCTACAAGGGAACCCCATTGCTGAAAAGGAAGCT
TTGGCCAAAAAGATCAAGAAACAGCTGCCAAATTTGCAGATTCTCAATGCTAAACCTATT
GAAAATGCCGTGAAAAAGGAAGAGGGTGGTAGAGTCGATGGTGAAAATGAAAGTGGTCAT
CTTGATAATGTCGCTTCTGATCGTAAGAGAAAGGAGTTGGTGCAAACAGAAAAAAGAACC
AATTATGACGTGGGGATTCCACTCGTTGAACTTGGCACAAGAGAGGAACAAAAGCGCAAA
AAACAGAAGAAGAGTGAAGTTTTGAAGGAGAAAGCATCAACCAACAAAAATGATACTGCC
GTCGGGGATAAGGAACCAGCTAAAAAGTCTAGTAAGAAGGCTAAACAACATAAAGCAAGT
GCCATTGACGATGGAGAAACTCCTTTTGCAGATCTTTTTGGTCCTGATTCATCAGAAGAT
CCATTGACTAGCAGTCGGAAGGGCGTTAATCACAACACACTCCAAAATGTTGATGCAGCT
GCAGGCTTGGTTACGTTCCCCAAAAAGAAAAAGAAGAACAAGAATCTGGTAACTGGTGCT
GCTGCTCTTCATTTGTCATCAGTAAGTGATGAAATTGGATTGGGTGGTACATCAACGTGG
GGTGACTAG

Peptide Sequence

PEP ID

XP_016491986.1
PEP Infomation

PREDICTED: protein phosphatase 1 regulatory subunit 7-like [Nicotiana tabacum]
Sequence

MAVLSWKQVLEDNNTTDPNSITSLSLTHKALSDVSCLSEFKNLQRLDLGFNNLTSLEGLK
LCVNLKWLSVVQNKLQSLKGIEGLIKLTVLNAGKNKLKSMDEVSGLANLRALILNDNDIF
SICKLDKVQELNTLVLSRNPISGIGQSLAKINSITKLSLSNCQLQGIDSSLKSCTELKEL
RLAHNDIKTLPNELAFNIKLQNIDIGNNVIMKWSDLKVLSSLVNLKNLNLQGNPIAEKEA
LAKKIKKQLPNLQILNAKPIENAVKKEEGGRVDGENESGHLDNVASDRKRKELVQTEKRT
NYDVGIPLVELGTREEQKRKKQKKSEVLKEKASTNKNDTAVGDKEPAKKSSKKAKQHKAS
AIDDGETPFADLFGPDSSEDPLTSSRKGVNHNTLQNVDAAAGLVTFPKKKKKNKNLVTGA
AALHLSSVSDEIGLGGTSTWGD

Transcript Sequence

Gene sequence data has not been registered.